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Data-driven reconstruction of directed networks
Authors: Hempel, Sabrina; Koseska, Aneta; Nikoloski, Zoran
Date of Publication (YYYY-MM-DD): 2013-06
Title of Journal: The European Physical Journal B
Volume: 86
Issue / Number: 6
Start Page: 250:1
End Page: 250:17
Sequence Number of Article: 250
Document Type: Article
ID: 668129.0


A Naturally Associated Rhizobacterium of Arabidopsis thaliana Induces a Starvation-Like Transcriptional Response while Promoting Growth
Authors: Schwachtje, J.; Karojet, S.; Thormaehlen, I.; Bernholz, C.; Kunz, S.; Brouwer, S.; Schwochow, M.; Koehl, K.; van Dongen, J. T.
Date of Publication (YYYY-MM-DD): 2011-12
Title of Journal: PLoS ONE
Volume: 6
Issue / Number: 12
Sequence Number of Article: e29382
Document Type: Article
ID: 586938.0


A quantitative comparison of CalvinBenson cycle models
Authors: Arnold, A.; Nikoloski, Z.
Date of Publication (YYYY-MM-DD): 2011-12
Title of Journal: Trends in Plant Science
Volume: 16
Issue / Number: 12
Start Page: 676
End Page: 683
Document Type: Article
ID: 586966.0


Herbivore-Induced Changes in Tomato (Solanum lycopersicum) Primary Metabolism: A Whole Plant Perspective
Authors: Steinbrenner, A. D.; Gomez, S.; Osorio, S.; Fernie, A. R.; Orians, C. M.
Date of Publication (YYYY-MM-DD): 2011-12
Title of Journal: Journal of Chemical Ecology
Volume: 37
Issue / Number: 12
Start Page: 1294
End Page: 1303
Document Type: Article
ID: 586941.0


Metabolic and miRNA Profiling of TMV Infected Plants Reveals Biphasic Temporal Changes
Authors: Bazzini, A. A.; Manacorda, C. A.; Tohge, T.; Conti, G.; Rodriguez, M. C.; Nunes-Nesi, A.; Villanueva, S.; Fernie, A. R.; Carrari, F.; Asurmendi, S.
Date of Publication (YYYY-MM-DD): 2011-12
Title of Journal: PLoS ONE
Volume: 6
Issue / Number: 12
Sequence Number of Article: e28466
Document Type: Article
ID: 586817.0


Metabolic profiling during peach fruit development and ripening reveals the metabolic networks that underpin each developmental stage
Authors: Lombardo, V. A.; Osorio, S.; Borsani, J.; Lauxmann, M. A.; Bustamante, C. A.; Budde, C. O.; Andreo, C. S.; Lara, M. V.; Fernie, A. R.; Drincovich, M. F.
Date of Publication (YYYY-MM-DD): 2011-12
Title of Journal: Plant Physiology
Volume: 157
Issue / Number: 4
Start Page: 1696
End Page: 1710
Document Type: Article
ID: 586892.0


The Composition of Plant Mitochondrial Supercomplexes Changes with Oxygen Availability
Authors: Ramirez-Aguilar, S. J.; Keuthe, M.; Rocha, M.; Fedyaev, V. V.; Kramp, K.; Gupta, K. J.; Rasmusson, A. G.; Schulze, W. X.; van Dongen, J. T.
Date of Publication (YYYY-MM-DD): 2011-12
Title of Journal: Journal of Biological Chemistry
Volume: 286
Issue / Number: 50
Start Page: 43045
End Page: 43053
Document Type: Article
ID: 586920.0


Tomato fruit photosynthesis is seemingly unimportant in primary metabolism and ripening but plays a considerable role in seed development
Authors: Lytovchenko, A.; Eickmeier, I.; Pons, C.; Osorio, S.; Szecowka, M.; Lehmberg, K.; Arrivault, S.; Tohge, T.; Pineda, B.; Anton, M. T.; Hedtke, B.; Lu, Y.; Fisahn, J.; Bock, R.; Stitt, M.; Grimm, B.; Granell, A.; Fernie, A. R.
Date of Publication (YYYY-MM-DD): 2011-12
Title of Journal: Plant Physiology
Volume: 157
Issue / Number: 4
Start Page: 1650
End Page: 1663
Document Type: Article
ID: 586964.0


Transcriptional and metabolic programs following exposure of plants to UV-B irradiation
Authors: Tohge, T.; Kusano, M.; Fukushima, A.; Saito, K.; Fernie, A. R.
Date of Publication (YYYY-MM-DD): 2011-12
Title of Journal: Plant Signaling & Behavior
Volume: 6
Issue / Number: 12
Document Type: Article
ID: 586949.0


AXY8 encodes an alpha-fucosidase, underscoring the importance of apoplastic metabolism on the fine structure of Arabidopsis cell wall polysaccharides
Authors: Gunl, M.; Neumetzler, L.; Kraemer, F.; de Souza, A.; Schultink, A.; Pena, M.; York, W. S.; Pauly, M.
Date of Publication (YYYY-MM-DD): 2011-11
Title of Journal: Plant Cell
Volume: 23
Issue / Number: 11
Start Page: 4025
End Page: 4040
Document Type: Article
ID: 586857.0