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          Institute: MPI für molekulare Genetik     Collection: Department of Vertebrate Genomics     Display Documents



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ID: 230576.0, MPI für molekulare Genetik / Department of Vertebrate Genomics
Transcript level alterations reflect gene dosage effects across multiple tissues in a mouse model of Down Syndrome
Authors:Kahlem, Pascal; Sultan, Marc; Herwig, Ralf; Steinfath, Matthias; Balzereit, Daniela; Eppens, Barbara; Saran, Nidhi G.; Pletcher, Mathew T.; South, Sarah T.; Stetten, Gail; Lehrach, Hans; Reeves, Roger H.; Yaspo, Marie-Laure
Language:English
Date of Publication (YYYY-MM-DD):2004-07
Title of Journal:Genome Research
Journal Abbrev.:Genome Res
Volume:14
Issue / Number:7
Start Page:1258
End Page:1267
Copyright:© 2004 by Cold Spring Harbor Laboratory Press
Review Status:not specified
Audience:Experts Only
Abstract / Description:Human trisomy 21, which results in Down syndrome (DS), is one of the most complicated congenital genetic anomalies compatible with life, yet little is known about the molecular basis of DS. It is generally accepted that chromosome 21 (Chr21) transcripts are overexpressed by about 50% in cells with an extra copy of this chromosome. However, this assumption is difficult to test in humans due to limited access to tissues, and direct support for this idea is available for only a few Chr21 genes or in a limited number of tissues. The Ts65Dn mouse is widely used as a model for studies of DS because it is at dosage imbalance for the orthologs of about half of the 284 Chr21 genes. Ts65Dn mice have several features that directly parallel developmental anomalies of DS. Here we compared the expression of 136 mouse orthologs of Chr21 genes in nine tissues of the trisomic and euploid mice. Nearly all of the 77 genes which are at dosage imbalance in Ts65Dn showed increased transcript levels in the tested tissues, providing direct support for a simple model of increased transcription proportional to the gene copy number. However, several genes escaped this rule, suggesting that they may be controlled by additional tissue-specific regulatory mechanisms revealed in the trisomic situation.
Comment of the Author/Creator:Supplemental material is available online at www.genome.org and at http://chr21.molgen.mpg.de. Array data are deposited in the Array Express database at EBI (http://www.ebi.ac.uk/arrayexpress), accession no. E-MEXP-102.
External Publication Status:published
Document Type:Article
Communicated by:Hans Lehrach
Affiliations:MPI für molekulare Genetik
External Affiliations:Departments of Physiology, Obstetrics and Gynecology, Johns Hopkins University School of Medicine, Baltimore, Maryland 21205, USA
Identifiers:ISSN:1088-9051
DOI:10.1101/gr.1951304
URL:http://www.genome.org/cgi/doi/10.1101/gr.1951304
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