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          Institute: MPI für Entwicklungsbiologie     Collection: Abteilung 6 - Molecular Biology (D. Weigel)     Display Documents



ID: 402900.0, MPI für Entwicklungsbiologie / Abteilung 6 - Molecular Biology (D. Weigel)
At-TAX: a whole genome tiling array resource for developmental expression analysis and transcript identification in Arabidopsis thaliana
Authors:Laubinger, S.; Zeller, G.; Henz, S. R.; Sachsenberg, T.; Widmer, C. K.; Naouar, N.; Vuylsteke, M.; Scholkopf, B.; Ratsch, G.; Weigel, D.
Date of Publication (YYYY-MM-DD):2008
Journal Abbrev.:Genome Biol
Volume:9
Issue / Number:7
Start Page:R112
Audience:Not Specified
Abstract / Description:Gene expression maps for model organisms, including Arabidopsis thaliana, have typically been created using gene-centric expression arrays. Here, we describe a comprehensive expression atlas, Arabidopsis thaliana Tiling Array Express (At-TAX), which is based on whole-genome tiling arrays. We demonstrate that tiling arrays are accurate tools for gene expression analysis and identified more than 1,000 unannotated transcribed regions. Visualizations of gene expression estimates, transcribed regions, and tiling probe measurements are accessible online at the At-TAX homepage.
Free Keywords:Arabidopsis/*genetics/*growth & development; *Gene Expression Profiling; Gene Expression Regulation, Developmental; *Gene Expression Regulation, Plant; Genome, Plant; *Oligonucleotide Array Sequence Analysis; Online Systems; Polyadenylation; RNA, Messenger/chemistry/metabolism; Software
External Publication Status:published
Document Type:Article
Affiliations:MPI für Entwicklungsbiologie/Abteilung 6 - Molekulare Biologie (Detlef Weigel)/
External Affiliations:%G eng
Identifiers:ISSN:1465-6914 (Electronic) %R gb-2008-9-7-r112 [pii] 10.1186/gb-2008-9-7-r112
URL:http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=...
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