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Alignment-free detection of local similarity among viral and bacterial genomes
Authors: Domazet-Lošo, Mirjana; Haubold, Bernhard
Date of Publication (YYYY-MM-DD): 2011-06-01
Title of Journal: Bioinformatics
Volume: 27
Issue / Number: 11
Start Page: 1466
End Page: 1472
Document Type: Article
ID: 564941.0
 
Full text / Content available
Estimating parameters of speciation models based on refined summaries of the joint site-frequency spectrum
Authors: Tellier, Aurélien; Pfaffelhuber, Peter; Haubold, Bernhard; Naduvilezhath, Lisha; Rose, Laura E.; Städler, Thomas; Stephan, Wolfgang; Metzler, Dirk
Date of Publication (YYYY-MM-DD): 2011-05-26
Title of Journal: PLoS ONE
Volume: 6
Issue / Number: 5
Sequence Number of Article: e18155
Document Type: Article
ID: 572149.0
 
Full text / Content available
Alignment-free estimation of nucleotide diversity
Authors: Haubold, Bernhard; Reed, Floyd A.; Pfaffelhuber, Peter
Date of Publication (YYYY-MM-DD): 2011-02-15
Title of Journal: Bioinformatics
Volume: 27
Issue / Number: 4
Start Page: 449
End Page: 455
Document Type: Article
ID: 572048.0
 
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Algorithms for efficient alignment-free sequence comparison
Referees: Ristov, Strahil
Advisors: Haubold, Bernhard
Authors: Domazet-Lošo, Mirjana
Name of University: University of Zagreb
Place of University: Zagreb
Date of Approval (YYYY-MM-DD): 2010-10-07
Document Type: PhD-Thesis
ID: 544378.0
 
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Nucleotide divergence vs. gene expression differentiation: comparative transcriptome sequencing in natural isolates from the carrion crow and its hybrid zone with the hooded crow
Authors: Wolf, Jochen B. W.; Bayer, Till; Haubold, Bernhard; Schilhabel, Markus; Rosenstiel, Philip; Tautz, Diethard
Date of Publication (YYYY-MM-DD): 2010-02-10
Title of Journal: Molecular Ecology
Volume: 19
Issue / Number: 1
Start Page: 162
End Page: 175
Document Type: Article
ID: 452647.0
 
Full text / Content available
mlRho – a program for estimating the population mutation and recombination rates from shotgun-sequenced diploid genomes
Authors: Haubold, Bernhard; Pfaffelhuber, Peter; Lynch, Michael
Date of Publication (YYYY-MM-DD): 2010-02-10
Title of Journal: Molecular Ecology
Volume: 19
Issue / Number: 1
Start Page: 277
End Page: 284
Document Type: Article
ID: 452777.0
 
Full text / Content available
Efficient estimation of pairwise distances between genomes
Authors: Domazet-Lošo, Mirjana; Haubold, Bernhard
Date of Publication (YYYY-MM-DD): 2009-10-13
Title of Journal: Bioinformatics
Volume: 25
Issue / Number: 24
Start Page: 3221
End Page: 3227
Document Type: Article
ID: 440827.0
 
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The impact of sampling schemes on the site frequency spectrum in nonequilibrium subdivided populations
Authors: Städler, Thomas; Haubold, Bernhard; Merino, Carlos; Stephan, Wolfgang; Pfaffelhuber, Peter
Date of Publication (YYYY-MM-DD): 2009-05
Title of Journal: Genetics
Volume: 182
Issue / Number: 1
Start Page: 205
End Page: 216
Document Type: Article
ID: 438830.0
 
Full text / Content available
Estimating mutation distances from unaligned genomes
Authors: Haubold, Bernhard; Pfaffelhuber, Peter; Domazet-Lošo, Mirjana; Wiehe, Thomas
Date of Publication (YYYY-MM-DD): 2009
Title of Journal: Journal of Computational Biology
Volume: 16
Issue / Number: 10
Start Page: 1487
End Page: 1500
Document Type: Article
ID: 438828.0
 
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An alignment-free distance measure for closely related genomes
Authors: Haubold, Bernhard; Domazet-Lošo, Mirjana; Wiehe, Thomas
Place of Publication: Berlin, Heidelberg
Publisher: Springer
Date of Publication (YYYY-MM-DD): 2008
Name of Conference/Meeting: RECOMB Workshop on Comparative Genomics
Title of Proceedings: Comparative genomics : international workshop, RECOMB-CG 2008, Paris, France, October 13-15, 2008 ; Proceedings
Start Page: 87
End Page: 99
Title of Series: Lecture Notes in Computer Science: Lecture Notes in Bioinformatics
Volume (in Series): 5267
Document Type: Conference-Paper
ID: 400145.0
 
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Entries: 1-10  
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