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An Iterative Strategy for Precursor Ion Selection for LC-MS/MS Based Shotgun Proteomics.
Authors: Zerck, Alexandra; Nordhoff, Eckhard; Resemann, Anja; Mirgorodskaya, Ekaterina; Suckau, Detlef; Reinert, Knut; Lehrach, Hans; Gobom, Johan
Date of Publication (YYYY-MM-DD): 2009-04-30
Title of Journal: Journal of Proteome Research
Volume: 8
Issue / Number: 7
Start Page: 3239
End Page: 3251
Document Type: Article
ID: 457851.0
 
Full text / Content available
Fast and adaptive variable order Markov chain construction
Authors: Schulz, Marcel H.; Weese, David; Rausch, Tobias; Döring, Andreas; Reinert, Knut; Vingron, Martin
Title of Book: Algorithms in Bioinformatics
Start Page: 306
End Page: 317
Place of Publication: Berlin / Heidelberg
Publisher: Springer
Date of Publication (YYYY-MM-DD): 2008-09-18
Document Type: InBook
ID: 405120.0
Segment-based multiple sequence alignment
Authors: Rausch, Tobias; Emde, Anne-Katrin; Weese, David; Döring, Andreas; Notredame, Cedric; Reinert, Knut
Date of Publication (YYYY-MM-DD): 2008-01-01
Title of Journal: Bioinformatics
Volume: 24(16):
Issue / Number: 16
Start Page: i187
End Page: i192
Document Type: Article
ID: 404576.0
 
Full text / Content available
Integer linear programming approaches for non-unique probe selection.
Authors: Klau, Gunnar W.; Rahmann, Sven; Schliep, Alexander; Vingron, Martin; Reinert, Knut
Title of Book: Discrete Mathematics and Data Mining II - DM & DM II
Start Page: 840
End Page: 856
Place of Publication: Amsterdam et al
Publisher: Elsevier
Date of Publication (YYYY-MM-DD): 2007-04-01
Document Type: InBook
ID: 336031.0
 
Full text / Content available
Analytical model of peptide mass cluster centres with applications
Authors: Wolski, Witold E.; Farrow, Malcolm; Emde, Anne-Katrin; Lehrach, Hans; Lalowski, Maciej; Reinert, Knut
Date of Publication (YYYY-MM-DD): 2006-09-23
Title of Journal: Proteome Science
Volume: 4
Start Page: 18
End Page: 18
Document Type: Article
ID: 313073.0
 
Full text / Content available
Transformation and other factors of the peptide mass spectrometry pairwise peak-list comparison process
Authors: Wolski, Witold E.; Lalowski, Maciej; Martus, Peter; Herwig, Ralf; Giavalisco, Patrick; Gobom, Johan; Sickmann, Albert; Lehrach, Hans; Reinert, Knut
Date of Publication (YYYY-MM-DD): 2005-11-30
Title of Journal: BMC Bioinformatics
Volume: 6
Start Page: 285
End Page: 285
Document Type: Article
ID: 276172.0
 
Full text / Content available
Optimal robust non-unique probe selection using Integer Linear Programming
Authors: Klau, Gunnar W.; Rahmann, Sven; Schliep, Alexander; Vingron, Martin; Reinert, Knut
Date of Publication (YYYY-MM-DD): 2004-08-01
Name of Conference/Meeting: Twelfth International Conference on Intelligent Systems for Molecular Biology/Third European Conference on Computational Biology
Title of Journal: Bioinformatics
Volume (in Journal): 20
Issue / Number: Suppl.
Start Page: i186
End Page: i193
Document Type: Conference-Paper
ID: 226569.0
Multiple sequence alignment with arbitrary gap costs: Computing an optimal solution using polyhedral combinatorics
Editors: Lengauer, Thomas
Authors: Althaus, Ernst; Caprara, Alberto; Lenhof, Hans-Peter; Reinert, Knut
Place of Publication: Oxford, UK
Publisher: Oxford University Press
Date of Publication (YYYY-MM-DD): 2002
Title of Proceedings: Proceedings of the European Conference on Computational Biology (ECCB 2002)
Start Page: S4
End Page: S16
Title of Series: Bioinformatics
Document Type: Conference-Paper
ID: 202065.0
A polyhedral approach to sequence alignment problems
Authors: Kececioglu, John; Lenhof, Hans-Peter; Mehlhorn, Kurt; Mutzel, Petra; Reinert, Knut; Vingron, Martin
Date of Publication (YYYY-MM-DD): 2000
Title of Journal: Discrete Applied Mathematics
Volume: 104
Start Page: 143
End Page: 186
Document Type: Article
ID: 344443.0
The practical use of the A* algorithm for exact multiple sequence alignment
Authors: Lermen, Martin; Reinert, Knut
Date of Publication (YYYY-MM-DD): 2000
Title of Journal: Journal of Computational Biology
Volume: 7
Issue / Number: 5
Start Page: 665
End Page: 671
Document Type: Article
ID: 518150.0
Entries: 1-10  
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