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| Docking Analysis and Resistance Evaluation of Clinically Relevant Mutations Associated with the HIV-1 Nonnucleoside Reverse Transcriptase Inhibitors Nevirapine, Efavirenz and Etravirine |
| Authors: Alcaro, Stefano; Alteri, Claudia; Artese, Anna; Ceccherini-Silberstein, Francesca; Costa, Giosuè; Ortuso, Francesco; Forbici, Federica; Santoro, Maria Mercedes; Parrotta, Lucia; Flandre, Philippe; Descamps, Diane; Calvez, Vincent; Marcelin, Anne-Genevieve; Perno, Carlo Federico; Sing, Tobias; Svicher, Valentina | | Date of Publication (YYYY-MM-DD): 2011 | | Title of Journal: ChemMedChem | | Volume: 6 | | Issue / Number: 12 | | Start Page: 2203 | | End Page: 2213 | | Document Type: Article | | ID: 618842.0 |
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| Advantages of Predicted Phenotypes and Statistical Learning Models in Inferring Virological Response to Antiretroviral Therapy from HIV Genotype |
| Authors: Altmann, Andre; Sing, Tobias; Vermeiren, Hans; Winters, Bart; Van Craenenbroeck, Elke; Van der Borght, Koen; Rhee, Soo-Yon; Shafer, Robert W; Schülter, Eugen; Kaiser, Rolf; Peres, Yardena; Sönnerborg, Anders; Fessel, W Jeffrey; Incardona, Francesca; Zazzi, Maurizio; Bacheler, Lee; Van Vlijmen, Hermann; Lengauer, Thomas | | Date of Publication (YYYY-MM-DD): 2009 | | Title of Journal: Antiviral Therapy | | Volume: 14 | | Issue / Number: 2 | | Start Page: 273 | | End Page: 283 | | Document Type: Article | | ID: 520923.0 |
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| Dynamics of NRTI resistance mutations during therapy interruption |
| Authors: Trignetti, M.; Sing, Tobias; Svicher, V.; Santoro, M.M.; Forbici, R.; D'arrigo, R.; Bellocchi, M.C.; Santoro, M.; Marconi, P.; Zaccarelli, M.; Tortta, M.P.; Bellagamba, R.; Narciso, P.; Antinori, A.; Perno, C.F.; Lengauer, Thomas; Ceccherini-Silberstein, F. | | Date of Publication (YYYY-MM-DD): 2009 | | Title of Journal: AIDS Research and Human Retroviruses | | Volume: 25 | | Issue / Number: 1 | | Document Type: Article | | ID: 520915.0 |
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| CD4-Dependent Characteristics of Coreceptor Use and HIV Type 1 V3 Sequence in a Large Population of Therapy-Naive Individuals |
| Authors: Low, Andrew J.; Marchant, David; Brumme, Chanson J.; Brumme, Zabrina L.; Dong, Winnie; Sing, Tobias; Hogg, Robert S.; Montaner, Julio S. G.; Gill, Vikram; Cheung, Peter K.; Harrigan, P. Richard | | Date of Publication (YYYY-MM-DD): 2008 | | Title of Journal: AIDS Research and Human Retroviruses | | Volume: 24 | | Issue / Number: 2 | | Start Page: 219 | | End Page: 228 | | Document Type: Article | | ID: 428151.0 |
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| Characterization and structural analysis of novel mutations in human immunodeficiency virus type 1 reverse transcriptase involved in the regulation of restistance to nonnucleoside inhibitors |
| Authors: Ceccherini-Silberstein, Francesca; Svicher, Valentina; Sing, Tobias; Artese, Anna; Santoro, Maria Mercedes; Forbici, Federica; Bertoli, Ada; Alcaro, Stefano; Palamara, Guido; Monforte, Antonella d'Arminio; Balzarini, Jan; Antinori, Andrea; Lengauer, Thomas; Perno, Carlo Federico | | Date of Publication (YYYY-MM-DD): 2007 | | Title of Journal: Journal of Virology | | Volume: 81 | | Issue / Number: 20 | | Start Page: 11507 | | End Page: 11519 | | Document Type: Article | | ID: 356613.0 |
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| Fifteen years of Env C2V3C3 evolution in six individuals clonally infected with human immunodeficiency virus type 1 |
| Authors: Kupfer, Bernd; Sing, Tobias; Schüffler, Peter; Hall, Rabea; Kurz, Ralf; McKeown, Astrid; Schneweis, Karl-Eduard; Eberl, Wolfgang; Oldenburg, Johannes; Brackmann, Hans H.; Rockstroh, Jürgen K.; Spengler, Ulrich; Däumer, Martin P.; Kaiser, Rolf; Lengauer, Thomas; Matz, Bertfried | | Date of Publication (YYYY-MM-DD): 2007 | | Title of Journal: Journal of Medical Virology | | Volume: 79 | | Issue / Number: 11 | | Start Page: 1629 | | End Page: 1639 | | Document Type: Article | | ID: 356559.0 |
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| Improved prediction of response to antiretroviral combination therapy using the genetic barrier to drug resistance |
| Authors: Altmann, Andre; Beerenwinkel, Niko; Sing, Tobias; Savenkov, Igor; Däumer, Martin; Kaiser, Rolf; Rhee, Soo-Yon; Fessel, W Jeffrey; Shafer, Robert W; Lengauer, Thomas | | Date of Publication (YYYY-MM-DD): 2007 | | Title of Journal: Antiviral Therapy | | Volume: 12 | | Issue / Number: 2 | | Start Page: 169 | | End Page: 178 | | Document Type: Article | | ID: 356656.0 |
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| Mutagenetic tree Fisher kernel improves prediction of HIV drug resistance from viral genotype |
| Authors: Sing, Tobias; Beerenwinkel, Niko | | Place of Publication: Cambridge, MA, USA | | Publisher: MIT | | Date of Publication (YYYY-MM-DD): 2007 | | Title of Proceedings: Advances in Neural Information Processing Systems 19 : [proceedings of the 20th Conference on Advances in Neural Information Porcessing Systems (NIPS)] | | Start Page: 1297 | | End Page: 1304 | | Title of Series: Advances in Neural Information Processing Systems 19 | | Document Type: Conference-Paper | | ID: 356657.0 |
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