Bennetzen, M. V., J. Cox, M. Mann and J. S. Andersen: PhosphoSiteAnalyzer: A Bioinformatic Platform for Deciphering Phospho Proteomes Using Kinase Predictions Retrieved from NetworKIN. In: Journal of Proteome Research 11, 6, 3480-3486 (2012).
Lamond, A. I., M. Uhlen, S. Horning, A. Makarov, C. V. Robinson, L. Serrano, F. U. Hartl, W. Baumeister, A. K. Werenskiold, J. S. Andersen, O. Vorm, M. Linial, R. Aebersold and M. Mann: Advancing Cell Biology Through Proteomics in Space and Time (PROSPECTS). In: Molecular & Cellular Proteomics 11, 3, [1]-[12], Seq. No.: O112.017731 (2012).
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Jakobsen, L., K. Vanselow, M. Skogs, Y. Toyoda, E. Lundberg, I. Poser, L. G. Falkenby, M. Bennetzen, J. Westendorf, E. A. Nigg, M. Uhlen, A. A. Hyman and J. S. Andersen: Novel asymmetrically localizing components of human centrosomes identified by complementary proteomics methods. In: EMBO Journal 30, 8, 1520-1535 (2011).
Mortensen, P., J. W. Gouw, J. V. Olsen, S. E. Ong, K. T. G. Rigbolt, J. Bunkenborg, J. Cox, L. J. Foster, A. J. R. Heck, B. Blagoev, J. S. Andersen and M. Mann: MSQuant, an Open Source Platform for Mass Spectrometry-Based Quantitative Proteomics. In: Journal of Proteome Research 9, 1, 393-403 (2010).
Schimmel, J., K. M. Larsen, I. Matic, M. van Hagen, J. Cox, M. Mann, J. S. Andersen and A. C. O. Vertegaal: The Ubiquitin-Proteasome System Is a Key Component of the SUMO-2/3 Cycle. In: Molecular & Cellular Proteomics 7, 11, 2107-2122 (2008).
Schandorff, S., J. V. Olsen, J. Bunkenborg, B. Blagoev, Y. Zhang, J. S. Andersen and M. Mann: A mass spectrometry-friendly database for cSNP identification. In: NATURE METHODS 4, 6, 465-466 (2007).
Dengjel, J., V. Akimov, J. V. Olsen, J. Bunkenborg, M. Mann, B. Blagoev and J. S. Andersen: Quantitative proteomic assessment of very early cellular signaling events. In: Nature Biotechnology 25, 5, 566-568 (2007).
Andersen, J. S. and M. Mann: Organellar proteomics: turning inventories into insights. In: EMBO Reports 7, 9, 874-879 (2006).
Vertegaal, A. C., J. S. Andersen, S. C. Ogg, R. T. Hay, M. Mann and A. I. Lamond: Distinct and overlapping sets of SUMO-1 and SUMO-2 target proteins revealed by quantitative proteomics. In: Molecular & Cellular Proteomics 5, 12, 2298-2310 (2006).
Leung, A. K., L. Trinkle-Mulcahy, Y. W. Lam, J. S. Andersen, M. Mann and A. I. Lamond: NOPdb: Nucleolar Proteome Database. In: Nucleic Acids Research 34, Seq. No.: D218-20 (2006).
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