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BiQ Analyzer HT: locus-specific analysis of {DNA} methylation by high-throughput bisulfite sequencing
Authors: Lutsik, Pavlo; Feuerbach, Lars; Arand, Julia; Lengauer, Thomas; Walter, Jörn; Bock, Christoph
Date of Publication (YYYY-MM-DD): 2011
Title of Journal: Nucleic Acids Research
Volume: 39
Issue / Number: Suppl. 2
Start Page: W551
End Page: W556
Document Type: Article
ID: 618813.0


Genomic distribution and inter-sample variation of non-CpG methylation across human cell types
Authors: Ziller, Michael J.; Müller, Fabian; Liao, Jing; Zhang, Yingying; Gu, Hongcang; Bock, Christoph; Boyle, Patrick; Epstein, Charles B.; Bernstein, Bradley E.; Lengauer, Thomas; Gnirke, Andreas; Meissner, Alexander
Date of Publication (YYYY-MM-DD): 2011
Title of Journal: PLoS Genetics
Volume: 17
Issue / Number: 12
Start Page: e1002389,1
End Page: e1002389,15
Sequence Number of Article: e1002389
Document Type: Article
ID: 618811.0


Lung stem cell self-renewal relies on BMI1-dependent control of expression at imprinted loci
Authors: Zacharek, Sima J.; Fillmore, Christine M.; Lau, Allison N.; Gludish, David W.; Chou, alan; Ho, Joshua W. K.; Zamponi, Raffaella; Gazit, Roi; Bock, Christoph; Jäger, Natalie; Smith, Zachary D.; Kim, Tae-min; Saunders, Arven H.; Wong, Janice; Lee, Joo-Hyeon; Roach, Rebecca R.; Rossi, Derrick J.; Meissner, Alex; Gimelbrant, Alexander A.; Park, Peter J.; Kim, Carla F.
Date of Publication (YYYY-MM-DD): 2011
Title of Journal: Cell Stem Cell
Volume: 9
Issue / Number: 3
Start Page: 272
End Page: 280
Document Type: Article
ID: 618851.0


Preparation of reduced representation bisulfite sequencing libraries for genome-scale DNA methylation profiling
Authors: Gu, Hongcang; Smith, Zachary D.; Bock, Christoph; Boyle, Patrick; Gnirke, Andreas; Meissner, Alexander
Date of Publication (YYYY-MM-DD): 2011
Title of Journal: Nature Protocols
Volume: 6
Issue / Number: 4
Start Page: 468
End Page: 481
Document Type: Article
ID: 618845.0


Reference Maps of Human ES and {iPS} Cell Variation Enable High-Throughput Characterization of Pluripotent Cell Lines
Authors: Bock, Christoph; Kiskinis, Evangelos; Verstappen, Griet; Gu, Hongcang; Boulting, Gabriella; Smith, Zachary D.; Ziller, Michael; Croft, Gist F.; Amoroso, MacKenzie W.; Oakley, Derek H.; Gnirke, Andreas; Eggan, Kevin; Meissner, Alexander
Date of Publication (YYYY-MM-DD): 2011
Title of Journal: Cell
Volume: 144
Issue / Number: 3
Start Page: 439
End Page: 452
Document Type: Article
ID: 618843.0


An exhaustive methode for CpG island annotation
Authors: Feuerbach, Lars; Halachev, Konstantin; Lengauer, Thomas; Bock, Christoph
(Start) Date of Event
(YYYY-MM-DD):
 2009-04-01
Document Type: Poster
ID: 520896.0


Comparison of sequencing-based methods to profile DNA methylation and identification of monoallelic epigenetic modifications
Authors: Harris, R. Alan; Wang, Ting; Coarfa, Cristian; Nagarajan, Raman P.; Hong, Chibo; Downey, Sara L.; Johnson, Brett E.; Fouse, Shaun D.; Delaney, Allen; Zhao, Yongjun; Olshen, Adam; Ballinger, Tracy; Zhou, Xin; Forsberg, Kevin J.; Gu, Junchen; Echipare, Lorigail; O'Geen, Heriette; Lister, Ryan; Pelizzola, Mattia; Xi, Yuanxin; Epstein, Charles B.; Bernstein, Bradley E.; Hawkins, R. David; Ren, Bing; Chung, Wen-Yu; Gu, Hongcang; Bock, Christoph; Gnirke, Andreas; Zhang, Michael Q.; Haussler, David; Ecker, Joseph R.; Li, Wei; Farnham, Peggy J.; Waterland, Robert a.; Meissner, Alexander; Marra, Marco A.; Hirst, Martin; Milosavljevic, Aleksandar; Costello, Joseph F.
Date of Publication (YYYY-MM-DD): 2010
Title of Journal: Nature biotechnology
Volume: 28
Issue / Number: 10
Start Page: 1097
End Page: 1105
Document Type: Article
ID: 536652.0


Genome-scale DNA methylation mapping of clinical samples at single-nucleotide resolution
Authors: Gu, Hongcang; Bock, Christoph; Mikkelsen, Tarjei S.; Jäger, Natalie; Smith, Zachary D.; Tomazou, Eleni; Gnirke, Andreas; Lander, Eric S.; Meissner, Alexander
Date of Publication (YYYY-MM-DD): 2010
Title of Journal: Nature Methods
Volume: 7
Issue / Number: 2
Start Page: 133
End Page: 136
Document Type: Article
ID: 536651.0


Quantitative comparison of genome-wide DNA methylation mapping technologies
Authors: Bock, Christoph; Tomazou, Eleni M.; Brinkman, Arie B.; Müller, Fabian; Simmer, Femke; Gu, Hongcang; Jäger, Natalie; Gnirke, Andreas; Stunnenberg, Hendrik G.; Meissner, Alexander
Date of Publication (YYYY-MM-DD): 2010
Title of Journal: Nature biotechnology
Volume: 28
Issue / Number: 10
Start Page: 1106
End Page: 1114
Document Type: Article
ID: 536650.0


Web-based analysis of (epi-) genome data using EpiGRAPH and {Galaxy}.
Authors: Bock, Christoph; Von Kuster, Greg; Halachev, Konstantin; Taylor, James; Nekrutenko, Anton; Lengauer, Thomas
Title of Book: Genetic Variation : Methods and Protocols
Start Page: 275
End Page: 296
Place of Publication: New York, NY
Publisher: Springer
Date of Publication (YYYY-MM-DD): 2010
Document Type: InBook
ID: 536653.0