Sen, R., G. Doose and P. F. Stadler: Rare splice variants in long non-coding RNAs. In: Non-Coding RNA 3, 3, Seq. No.: 23 (2017).
doi: 10.3390/ncrna3030023
localid: training75968
Bernhart, S. H., H. Kretzmer, L. M. Holdt, F. Jühling, O. Ammerpohl, A. K. Bergmann, B. H. Northoff, G. Doose, R. Siebert, P. F. Stadler and S. Hoffmann: Changes of bivalent chromatin coincide with increased expression of developmental genes in cancer. In: Scientific Reports 6, Seq. No.: 37393 (2016).
doi: 10.1038/srep37393
localid: training74164
Kretzmer, H., S. H. Bernhart, W. Wang, A. Haake, M. A. Weniger, A. K. Bergmann, M. J. Betts, E. Carrillo-de-Santa-Pau, G. Doose, J. Gutwein, J. Richter, V. Hovestadt, B. Huang, D. Rico, F. Jühling, J. Kolarova, Q. Lu, C. Otto, R. Wagener, J. Arnolds, B. Burkhardt, A. Claviez, H. G. Drexler, S. Eberth, R. Eils, P. Flicek, S. Haas, M. Hummel, D. Karsch, H. H. D. Kerstens, W. Klapper, M. Kreuz, C. Lawerenz, D. Lenze, M. Loeffler, C. Lopez, R. A. F. MacLeod, J. H. A. Martens, M. Kulis, M.-S. J. Ignacio, P. Moeller, I. Nagel, S. Picelli, I. Vater, M. Rohde, P. Rosenstiel, M. Rosolowski, R. B. Russell, M. Schilhabel, M. Schlesner, P. F. Stadler, M. Szczepanowski, L. Trümper, H. G. Stunnenberg, R. Küppers, O. Ammerpohl, P. Lichter, R. Siebert, S. Hoffmann and B. Radlwimmer: DNA methylome analysis in Burkitt and follicular lymphomas identifies differentially methylated regions linked to somatic mutation and transcriptional control. In: Nature Genetics 47, 11, 1316-1325 (2015).
doi: 10.1038/ng.3413
localid: training72589
Hoffmann, S., C. Otto, G. Doose, A. Tanzer, D. Langenberger, S. Christ, M. Kunz, L. M. Holdt, D. Teupser, J. Hackermüller and P. F. Stadler: A multi-split mapping algorithm for circular RNA, splicing, trans-splicing and fusion detection. In: Genome Biology 15, 2, Seq. No.: R34 (2014).
doi: 10.1186/gb-2014-15-2-r34
localid: training66701
Nitsche, A., G. Doose, H. Tafer, M. Robinson, N. R. Saha, M. Gerdol, A. Canapa, S. Hoffmann, C. T. Amemiya and P. F. Stadler: Atypical RNAs in the coelacanth transcriptome. In: Journal of Experimental Zoology / B 322, 6, 342-351 (2014).
doi: 10.1002/jez.b.22542
localid: training67848
Doose, G., M. Alexis, R. Kirsch, S. Findeiss, D. Langenberger, R. Machne, M. Morl, S. Hoffmann and P. F. Stadler: Mapping the RNA-Seq trash bin unusual transcripts in prokaryotic transcriptome sequencing data. In: RNA Biology 10, 7, 1204-1210 (2013).
doi: 10.4161/rna.24972
localid: training65042
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