Metge, F., J.-M. Josten, F. Apelt, M. Müller, C. Hartmann, T. von Falkenhausen, P. Korkuc, J. Manin and R. Krause: Context-dependent annotation of protein domains. In: 25th German Conference on Bioinformatics (2010).
Wiedenhoeft, J., R. Krause and O. Eulenstein: Inferring evolutionary scenarios for protein domain compositions. In: Bioinformatics Research and Applications. (Eds.) Borodovsky, Mark; Gogarten, Johann; Przytycka, Teresa; Rajasekaran, Sanguthevar. Lecture Notes in Computer Science 6053. Springer, Berlin; Heidelberg (2010) 179-190.
url: http://dx.doi.org/10.1007/978-3-642-13078-6_21
doi: 10.1007/978-3-642-13078-6
Schliep, A. and R. Krause: Efficient Algorithms for the Computational Design of Optimal Tiling Arrays. In: IEEE/ACM Transactions on Computational Biology and Bioinformatics 5, 4, 557-567 (2008).
url: http://www2.computer.org/portal/web/csdl/doi/10.1109/TCBB.2008.50
Tegha-Dunghu, J., B. Neumann, R. Krause, H. Erfle, T. Walter, M. Held, P. Rogers, K. Hupfeld, T. Ruppert, J. Ellenberg and O. J. Gruss: EML3 is a nuclear microtubule-binding protein required for the correct alignment of chromosomes in metaphase. In: Journal of Cell Science 121, 1718-1726 (2008).
url: http://jcs.biologists.org/cgi/content/abstract/121/10/1718
doi: 10.1242/jcs.019174
Lee, J. S., R. Krause, J. Schreiber, H.-J. Mollenkopf, J. Kowall, R. Stein, B.-Y. Jeon, J.-Y. Kwak, M.-K. Song, J. P. Patron, S. Jorg, K. Roh, S.-N. Cho and S. H. Kaufmann: Mutation in the Transcriptional Regulator PhoP Contributes to Avirulence of Mycobacterium tuberculosis H37Ra Strain. In: Cell Host & Microbe 3, 2, 97-103 (2008).
url: http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B8G3Y-4RTTXSN-7&_user=28761&_rdoc=1&_fmt=&_orig=search&_sort=d&view=c&_acct=C000002718&_version=1&_urlVersion=0&_userid=28761&md5=f3a2e17163144190fcac728b66b6fc62#bcor1
doi: 10.1016/j.chom.2008.01.002
Lee, J. S., R. Krause, J. Schreiber, H. J. Mollenkopf, J. Kowall, R. Stein, B.-Y. Jeon, J.-Y. Kwak, M.-K. Song, J. P. Patron, S. Jorg, K. Roh, S.-N. Cho and S. H. E. Kaufmann: Mutation in the transcriptional regulator PhoP contributes to avirulence of Mycobacterium tuberculosis H37Ra strain. In: Cell Host & Microbe 3, 2, 97-103 (2008).
Semi-supervised learning for the identification of syn-expressed genes from fused microarray and in situ image data.. (Neural Information Processing Systems (NIPS) workshop on New Problems and Methods in Computational Biology, 2006-12-08 to 2006-12-08, Whistler, Canada). In: BMC Bioinformatics, 8(Suppl 10) (2007).
doi: 10.1186/1471-2105-8-S10-S3
url: http://www.biomedcentral.com/content/pdf/1471-2105-8-S10-S3.pdf
Rungsarityotin, W., R. Krause, A. Schödl and A. Schliep: Identifying protein complexes directly from high-throughput TAP data with Markov random fields. In: BMC Bioinformatics 8, Article Number: 482, 1-19 (2007).
doi: 10.1186/1471-2105-8-482
Hooper, S. D., S. Boué, R. Krause, L. J. Jensen, C. E. Mason, M. Ghanim, K. P. White, E. E. M. Furlong and P. Bork: Identification of tightly regulated groups of genes during Drosophila melanogaster embryogenesis.. In: Molecular Systems Biology 3, Seq. No.: 72 (2007).
doi: 10.1038/msb4100112
url: http://www.nature.com/msb/journal/v3/n1/pdf/msb4100112.pdf
Hooper, S. D., S. Boué, R. Krause, L. J. Jensen, C. E. Mason, M. Ghanim, K. P. White, E. E. M. Furlong and P. Bork: Identification of tightly regulated groups of genes during Drosophila melanogaster embryogenesis. In: Molecular Systems Biology 3, Seq. No.: 72 (2007).
doi: 10.1038/msb4100112.
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