Kucharik, M., I. L. Hofacker, P. F. Stadler and J. Qin: Pseudoknots in RNA folding landscapes. In: Bioinformatics 32, 2, 187-194 (2016).
doi: 10.1093/bioinformatics/btv572
localid: training73402
Kucharik, M., I. L. Hofacker, P. F. Stadler and J. Qin: Basin hopping graph : a computational framework to characterize RNA folding landscapes. In: Bioinformatics 30, 14, 2009-2017 (2014).
doi: 10.1093/bioinformatics/btu156
localid: training67393
Klemm, K., J. Qin and P. F. Stadler: Geometry and coarse-grained representations of landscapes. In: Recent advances in the theory and application of fitness landscapes. (Eds.) Hendrik Richter. Springer, Berlin (2014) 153-176.
doi: 10.1007/978-3-642-41888-4_6
localid: training61311
Qin, J., M. Fricke, M. Marz, P. F. Stadler and R. Backofen: Graph-distance distribution of the Boltzmann ensemble of RNA secondary structures. In: Algorithms for Molecular Biology 9, Seq. No.: 19 (2014).
doi: 10.1186/1748-7188-9-19
localid: training68460
Shan, R., E. V. Vilanova, J. Qin, F. Casper, G. H. Fecher, G. Jakob and C. Felser: Fabrication and characterization of semiconducting half-Heusler YPtSb thin films. In: Physica Status Solidi RRL 7, 1-2, 145-147 (2013).
doi: 10.1002/pssr.201206413
Lorenz, R., S. H. Bernhart, J. Qin, C. H. Siederdissen, F. Amman, A. Tanzer, F. Amman, I. L. Hofacker and P. F. Stadler: 2D meets 4G : G-Quadruplexes in RNA secondary structure prediction. In: IEEE ACM Transactions on Computational Biology and Bioinformatics 10, 4, 832-844 (2013).
doi: 10.1109/TCBB.2013.7
localid: training65079
Qin, J. and C. M. Reidys: On topological RNA interaction structures. In: Journal of Computational Biology 20, 7, 495-513 (2013).
doi: 10.1089/cmb.2012.0282
localid: training64090
Lorenz, R., S. H. Bernhart, F. Externbrink, J. Qin, C. H. Siederdissen, F. Amman, I. L. Hofacker and P. F. Stadler: RNA folding algorithms with g-quadruplexes. In: Advances in bioinformatics and computational biology : 7th Brazilian Symposium on Bioinformatics, BSB 2012, Campo Grande, Brazil, August 15-17, 2012 ; proceedings. (Eds.) Marcilio C. de Souto. Springer, Berlin [u. a.] (2012) 49-60.
doi: 10.1007/978-3-642-31927-3_5
localid: training61308
Li, A. X., M. Marz, J. Qin and C. M. Reidys: RNA-RNA interaction prediction based on multiple sequence alignments. In: Bioinformatics 27, 4, 456-463 (2011).
localid: training49779
Huang, F. W. D., J. Qin, C. M. Reidys and P. F. Stadler: Target prediction and a statistical sampling algorithm for RNA-RNA interaction. In: Bioinformatics 26, 2, 175-181 (2010).
localid: training46960
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